Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-6P43688 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Gm25016-201ENSMUST00000158399 131 ntBASIC16.36■□□□□ 0.21
Nkx2-6P43688 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.36■□□□□ 0.21
Nkx2-6P43688 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.36■□□□□ 0.21
Nkx2-6P43688 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nkx2-6P43688 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Nkx2-6P43688 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Mir1668-201ENSMUST00000184114 107 ntBASIC16.35■□□□□ 0.21
Nkx2-6P43688 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Gm7367-201ENSMUST00000057611 492 ntBASIC16.35■□□□□ 0.21
Nkx2-6P43688 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Nkx2-6P43688 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.34■□□□□ 0.21
Nkx2-6P43688 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.34■□□□□ 0.21
Nkx2-6P43688 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Nkx2-6P43688 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-6P43688 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Nkx2-6P43688 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nkx2-6P43688 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.32■□□□□ 0.2
Nkx2-6P43688 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Gm7370-201ENSMUST00000219471 767 ntBASIC16.32■□□□□ 0.2
Nkx2-6P43688 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Nkx2-6P43688 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms