Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HttP42859 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HttP42859 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HttP42859 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
HttP42859 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.58■□□□□ 0.56
HttP42859 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HttP42859 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.58■□□□□ 0.56
HttP42859 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.58■□□□□ 0.56
HttP42859 Chchd1-203ENSMUST00000224633 557 ntBASIC18.58■□□□□ 0.56
HttP42859 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HttP42859 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.57■□□□□ 0.56
HttP42859 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.57■□□□□ 0.56
HttP42859 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HttP42859 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Gm27321-201ENSMUST00000185021 205 ntBASIC18.56■□□□□ 0.56
HttP42859 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
HttP42859 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Gm9727-201ENSMUST00000161387 555 ntBASIC18.56■□□□□ 0.56
HttP42859 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.56■□□□□ 0.56
HttP42859 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HttP42859 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.56■□□□□ 0.56
HttP42859 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HttP42859 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HttP42859 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.55■□□□□ 0.56
HttP42859 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HttP42859 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HttP42859 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.55■□□□□ 0.56
HttP42859 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.55■□□□□ 0.56
HttP42859 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HttP42859 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HttP42859 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.55■□□□□ 0.56
HttP42859 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HttP42859 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HttP42859 Fst-202ENSMUST00000223640 2612 ntBASIC18.55■□□□□ 0.56
HttP42859 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HttP42859 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HttP42859 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HttP42859 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.55■□□□□ 0.56
HttP42859 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.55■□□□□ 0.56
HttP42859 Grk6-206ENSMUST00000224995 2971 ntBASIC18.55■□□□□ 0.56
HttP42859 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HttP42859 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HttP42859 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.54■□□□□ 0.56
HttP42859 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.54■□□□□ 0.56
HttP42859 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.54■□□□□ 0.56
HttP42859 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
HttP42859 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.54■□□□□ 0.56
HttP42859 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.54■□□□□ 0.56
HttP42859 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HttP42859 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 Gm14140-201ENSMUST00000119999 995 ntBASIC18.54■□□□□ 0.56
HttP42859 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.54■□□□□ 0.56
HttP42859 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HttP42859 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HttP42859 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HttP42859 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.53■□□□□ 0.56
HttP42859 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.53■□□□□ 0.56
HttP42859 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HttP42859 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
HttP42859 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HttP42859 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.52■□□□□ 0.56
HttP42859 Rprl3-201ENSMUST00000157400 290 ntBASIC18.52■□□□□ 0.56
HttP42859 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.52■□□□□ 0.56
HttP42859 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.52■□□□□ 0.56
HttP42859 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HttP42859 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HttP42859 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.52■□□□□ 0.56
HttP42859 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HttP42859 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms