Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.27■□□□□ 0.2
Sox6P40645 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Sox6P40645 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.27■□□□□ 0.2
Sox6P40645 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.27■□□□□ 0.2
Sox6P40645 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.27■□□□□ 0.2
Sox6P40645 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Gm44549-201ENSMUST00000208351 577 ntBASIC16.27■□□□□ 0.2
Sox6P40645 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox6P40645 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Sox6P40645 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox6P40645 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox6P40645 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Sox6P40645 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox6P40645 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox6P40645 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox6P40645 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox6P40645 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.26■□□□□ 0.19
Sox6P40645 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.26■□□□□ 0.19
Sox6P40645 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Sox6P40645 Gm12441-201ENSMUST00000121806 588 ntBASIC16.26■□□□□ 0.19
Sox6P40645 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Sox6P40645 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Sox6P40645 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.26■□□□□ 0.19
Sox6P40645 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.26■□□□□ 0.19
Sox6P40645 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.26■□□□□ 0.19
Sox6P40645 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox6P40645 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sox6P40645 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sox6P40645 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox6P40645 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox6P40645 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox6P40645 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Sox6P40645 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox6P40645 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Sox6P40645 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sox6P40645 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox6P40645 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox6P40645 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sox6P40645 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox6P40645 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sox6P40645 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.24■□□□□ 0.19
Sox6P40645 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.24■□□□□ 0.19
Sox6P40645 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Sox6P40645 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Sox6P40645 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.24■□□□□ 0.19
Sox6P40645 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Sox6P40645 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.24■□□□□ 0.19
Sox6P40645 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sox6P40645 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sox6P40645 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Sox6P40645 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Sox6P40645 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Sox6P40645 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Sox6P40645 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.23■□□□□ 0.19
Sox6P40645 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.23■□□□□ 0.19
Sox6P40645 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Sox6P40645 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms