Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.84■□□□□ 0.45
Cxcl12P40224 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cxcl12P40224 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cxcl12P40224 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.84■□□□□ 0.45
Cxcl12P40224 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.84■□□□□ 0.45
Cxcl12P40224 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cxcl12P40224 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.83■□□□□ 0.45
Cxcl12P40224 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cxcl12P40224 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Cxcl12P40224 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.83■□□□□ 0.44
Cxcl12P40224 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.83■□□□□ 0.44
Cxcl12P40224 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Cxcl12P40224 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cxcl12P40224 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cxcl12P40224 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.82■□□□□ 0.44
Cxcl12P40224 Gm8000-201ENSMUST00000188378 592 ntBASIC17.82■□□□□ 0.44
Cxcl12P40224 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.82■□□□□ 0.44
Cxcl12P40224 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cxcl12P40224 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Cxcl12P40224 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.82■□□□□ 0.44
Cxcl12P40224 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cxcl12P40224 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cxcl12P40224 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.81■□□□□ 0.44
Cxcl12P40224 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Gm11594-201ENSMUST00000122313 162 ntBASIC17.81■□□□□ 0.44
Cxcl12P40224 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Cxcl12P40224 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cxcl12P40224 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cxcl12P40224 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cxcl12P40224 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl12P40224 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cxcl12P40224 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl12P40224 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl12P40224 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.8■□□□□ 0.44
Cxcl12P40224 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl12P40224 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.8■□□□□ 0.44
Cxcl12P40224 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl12P40224 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cxcl12P40224 Gm6376-201ENSMUST00000209407 580 ntBASIC17.8■□□□□ 0.44
Cxcl12P40224 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.8■□□□□ 0.44
Cxcl12P40224 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.8■□□□□ 0.44
Cxcl12P40224 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl12P40224 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl12P40224 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl12P40224 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cxcl12P40224 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cxcl12P40224 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cxcl12P40224 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cxcl12P40224 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cxcl12P40224 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.79■□□□□ 0.44
Cxcl12P40224 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.79■□□□□ 0.44
Cxcl12P40224 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.79■□□□□ 0.44
Cxcl12P40224 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cxcl12P40224 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.79■□□□□ 0.44
Cxcl12P40224 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms