Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.75■□□□□ 0.43
Mmp13P33435 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp13P33435 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Mmp13P33435 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp13P33435 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp13P33435 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.75■□□□□ 0.43
Mmp13P33435 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp13P33435 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp13P33435 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp13P33435 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Mmp13P33435 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp13P33435 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Mmp13P33435 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Mmp13P33435 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp13P33435 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp13P33435 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Mmp13P33435 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp13P33435 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp13P33435 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp13P33435 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.74■□□□□ 0.43
Mmp13P33435 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp13P33435 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Mmp13P33435 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Mmp13P33435 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.73■□□□□ 0.43
Mmp13P33435 Dio3-201ENSMUST00000097228 1449 ntBASIC17.73■□□□□ 0.43
Mmp13P33435 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.73■□□□□ 0.43
Mmp13P33435 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.73■□□□□ 0.43
Mmp13P33435 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 Gm22240-201ENSMUST00000175225 82 ntBASIC17.73■□□□□ 0.43
Mmp13P33435 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Mmp13P33435 Flg-201ENSMUST00000050758 1488 ntBASIC17.73■□□□□ 0.43
Mmp13P33435 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Mmp13P33435 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.73■□□□□ 0.43
Mmp13P33435 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Mmp13P33435 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Mmp13P33435 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp13P33435 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp13P33435 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Mmp13P33435 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Mmp13P33435 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.72■□□□□ 0.43
Mmp13P33435 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.72■□□□□ 0.43
Mmp13P33435 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Mmp13P33435 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Mmp13P33435 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Mmp13P33435 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Mmp13P33435 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.71■□□□□ 0.43
Mmp13P33435 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.71■□□□□ 0.43
Mmp13P33435 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Gm38285-201ENSMUST00000192928 922 ntBASIC17.71■□□□□ 0.43
Mmp13P33435 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.71■□□□□ 0.43
Mmp13P33435 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Mmp13P33435 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Mmp13P33435 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Mmp13P33435 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.7■□□□□ 0.42
Mmp13P33435 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Mir8112-201ENSMUST00000184382 131 ntBASIC17.7■□□□□ 0.42
Mmp13P33435 Gm29791-202ENSMUST00000207888 369 ntBASIC17.7■□□□□ 0.42
Mmp13P33435 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Mmp13P33435 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Mmp13P33435 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms