Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nfkb1P25799 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nfkb1P25799 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nfkb1P25799 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nfkb1P25799 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.79■□□□□ 0.44
Nfkb1P25799 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.79■□□□□ 0.44
Nfkb1P25799 Gm37025-201ENSMUST00000195159 829 ntBASIC17.79■□□□□ 0.44
Nfkb1P25799 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Gm9731-201ENSMUST00000209480 747 ntBASIC17.79■□□□□ 0.44
Nfkb1P25799 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.79■□□□□ 0.44
Nfkb1P25799 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Nfkb1P25799 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Nfkb1P25799 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Nfkb1P25799 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nfkb1P25799 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Nfkb1P25799 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Gm16061-201ENSMUST00000122167 857 ntBASIC17.78■□□□□ 0.44
Nfkb1P25799 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Gm23634-201ENSMUST00000175071 91 ntBASIC17.78■□□□□ 0.44
Nfkb1P25799 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.78■□□□□ 0.44
Nfkb1P25799 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.78■□□□□ 0.44
Nfkb1P25799 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Nfkb1P25799 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Nfkb1P25799 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Nfkb1P25799 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nfkb1P25799 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nfkb1P25799 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Nfkb1P25799 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nfkb1P25799 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Nfkb1P25799 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Rarb-207ENSMUST00000225921 2756 ntBASIC17.76■□□□□ 0.43
Nfkb1P25799 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nfkb1P25799 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Gm22697-201ENSMUST00000175194 63 ntBASIC17.76■□□□□ 0.43
Nfkb1P25799 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.76■□□□□ 0.43
Nfkb1P25799 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Nfkb1P25799 Gm18101-201ENSMUST00000215769 548 ntBASIC17.76■□□□□ 0.43
Nfkb1P25799 Gm7370-201ENSMUST00000219471 767 ntBASIC17.76■□□□□ 0.43
Nfkb1P25799 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.76■□□□□ 0.43
Nfkb1P25799 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.76■□□□□ 0.43
Nfkb1P25799 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Nfkb1P25799 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Nfkb1P25799 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Nfkb1P25799 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nfkb1P25799 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Nfkb1P25799 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms