Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf8P23611 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf8P23611 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf8P23611 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf8P23611 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Irf8P23611 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf8P23611 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Irf8P23611 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Irf8P23611 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Irf8P23611 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Irf8P23611 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.67■□□□□ 0.58
Irf8P23611 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Irf8P23611 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Irf8P23611 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.66■□□□□ 0.58
Irf8P23611 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.66■□□□□ 0.58
Irf8P23611 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.66■□□□□ 0.58
Irf8P23611 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.66■□□□□ 0.58
Irf8P23611 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Gm5417-201ENSMUST00000079706 384 ntBASIC18.66■□□□□ 0.58
Irf8P23611 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Irf8P23611 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Irf8P23611 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.66■□□□□ 0.58
Irf8P23611 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Irf8P23611 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Irf8P23611 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Irf8P23611 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.65■□□□□ 0.58
Irf8P23611 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Gm27463-201ENSMUST00000183569 57 ntBASIC18.65■□□□□ 0.58
Irf8P23611 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Irf8P23611 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.65■□□□□ 0.58
Irf8P23611 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Irf8P23611 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Irf8P23611 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Irf8P23611 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Irf8P23611 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Irf8P23611 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Gm10252-201ENSMUST00000209541 832 ntBASIC18.64■□□□□ 0.57
Irf8P23611 Gm7791-201ENSMUST00000219066 539 ntBASIC18.64■□□□□ 0.57
Irf8P23611 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Irf8P23611 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf8P23611 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Irf8P23611 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf8P23611 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.63■□□□□ 0.57
Irf8P23611 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf8P23611 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf8P23611 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf8P23611 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Irf8P23611 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.63■□□□□ 0.57
Irf8P23611 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf8P23611 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.63■□□□□ 0.57
Irf8P23611 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf8P23611 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Irf8P23611 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms