Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm3P21107 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm3P21107 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm3P21107 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Tpm3P21107 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm3P21107 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Tpm3P21107 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Tpm3P21107 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.46■□□□□ 0.7
Tpm3P21107 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm3P21107 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm3P21107 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tpm3P21107 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tpm3P21107 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm3P21107 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.45■□□□□ 0.7
Tpm3P21107 Gm40848-201ENSMUST00000221998 324 ntBASIC19.45■□□□□ 0.7
Tpm3P21107 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm3P21107 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm3P21107 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm3P21107 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm3P21107 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm3P21107 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm3P21107 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.44■□□□□ 0.7
Tpm3P21107 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.44■□□□□ 0.7
Tpm3P21107 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Tpm3P21107 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Tpm3P21107 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm3P21107 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.43■□□□□ 0.7
Tpm3P21107 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Gm21956-201ENSMUST00000179946 522 ntBASIC19.43■□□□□ 0.7
Tpm3P21107 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.43■□□□□ 0.7
Tpm3P21107 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tpm3P21107 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tpm3P21107 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm3P21107 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.42■□□□□ 0.7
Tpm3P21107 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm3P21107 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.42■□□□□ 0.7
Tpm3P21107 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm3P21107 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm3P21107 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Tpm3P21107 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tpm3P21107 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm3P21107 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm3P21107 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tpm3P21107 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm3P21107 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Tpm3P21107 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.41■□□□□ 0.7
Tpm3P21107 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.41■□□□□ 0.7
Tpm3P21107 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
Tpm3P21107 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Tpm3P21107 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Tpm3P21107 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.41■□□□□ 0.7
Tpm3P21107 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm3P21107 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm3P21107 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm3P21107 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Tpm3P21107 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm3P21107 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Tpm3P21107 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm3P21107 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm3P21107 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm3P21107 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.4■□□□□ 0.7
Tpm3P21107 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Tpm3P21107 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm3P21107 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm3P21107 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm3P21107 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms