Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rb1P13405 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.66■□□□□ 0.42
Rb1P13405 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rb1P13405 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rb1P13405 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Rb1P13405 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rb1P13405 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Rb1P13405 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Rb1P13405 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Rb1P13405 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.65■□□□□ 0.42
Rb1P13405 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.65■□□□□ 0.42
Rb1P13405 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rb1P13405 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.64■□□□□ 0.42
Rb1P13405 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.64■□□□□ 0.41
Rb1P13405 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rb1P13405 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rb1P13405 Gm7889-201ENSMUST00000185591 958 ntBASIC17.64■□□□□ 0.41
Rb1P13405 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.64■□□□□ 0.41
Rb1P13405 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rb1P13405 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rb1P13405 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rb1P13405 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rb1P13405 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Rb1P13405 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Rb1P13405 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.63■□□□□ 0.41
Rb1P13405 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.63■□□□□ 0.41
Rb1P13405 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.63■□□□□ 0.41
Rb1P13405 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rb1P13405 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rb1P13405 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rb1P13405 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.62■□□□□ 0.41
Rb1P13405 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rb1P13405 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rb1P13405 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.62■□□□□ 0.41
Rb1P13405 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.62■□□□□ 0.41
Rb1P13405 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.62■□□□□ 0.41
Rb1P13405 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.62■□□□□ 0.41
Rb1P13405 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.62■□□□□ 0.41
Rb1P13405 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rb1P13405 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.62■□□□□ 0.41
Rb1P13405 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rb1P13405 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rb1P13405 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms