Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Gm13559-201ENSMUST00000120476 863 ntBASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.45□□□□□ -0.1
Ly6c1P0CW02 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ly6c1P0CW02 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Gm7791-201ENSMUST00000219066 539 ntBASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.44□□□□□ -0.1
Ly6c1P0CW02 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Ly6c1P0CW02 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Gm27463-201ENSMUST00000183569 57 ntBASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Gm37025-201ENSMUST00000195159 829 ntBASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ly6c1P0CW02 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Ly6c1P0CW02 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms