Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hdac3O88895 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hdac3O88895 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Hdac3O88895 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.49■□□□□ 0.07
Hdac3O88895 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Hdac3O88895 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hdac3O88895 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Hdac3O88895 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15.48■□□□□ 0.07
Hdac3O88895 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC15.48■□□□□ 0.07
Hdac3O88895 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.48■□□□□ 0.07
Hdac3O88895 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.48■□□□□ 0.07
Hdac3O88895 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.48■□□□□ 0.07
Hdac3O88895 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Hdac3O88895 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.48■□□□□ 0.07
Hdac3O88895 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hdac3O88895 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Hdac3O88895 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.48■□□□□ 0.07
Hdac3O88895 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Hdac3O88895 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Hdac3O88895 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Hdac3O88895 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.47■□□□□ 0.07
Hdac3O88895 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hdac3O88895 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Hdac3O88895 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Hdac3O88895 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hdac3O88895 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hdac3O88895 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hdac3O88895 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Hdac3O88895 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hdac3O88895 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hdac3O88895 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.46■□□□□ 0.07
Hdac3O88895 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hdac3O88895 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hdac3O88895 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
Hdac3O88895 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.46■□□□□ 0.06
Hdac3O88895 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hdac3O88895 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Hdac3O88895 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Hdac3O88895 Gm20049-201ENSMUST00000219950 730 ntBASIC15.45■□□□□ 0.06
Hdac3O88895 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.45■□□□□ 0.06
Hdac3O88895 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Hdac3O88895 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hdac3O88895 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Hdac3O88895 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.44■□□□□ 0.06
Hdac3O88895 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Mir6349-201ENSMUST00000184059 97 ntBASIC15.44■□□□□ 0.06
Hdac3O88895 Gm10138-203ENSMUST00000206952 366 ntBASIC15.44■□□□□ 0.06
Hdac3O88895 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.44■□□□□ 0.06
Hdac3O88895 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Hdac3O88895 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.44■□□□□ 0.06
Hdac3O88895 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Hdac3O88895 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Hdac3O88895 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Hdac3O88895 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Hdac3O88895 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
Hdac3O88895 Gm21596-201ENSMUST00000178049 1316 ntBASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms