Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShdO88834 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
ShdO88834 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ShdO88834 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ShdO88834 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ShdO88834 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
ShdO88834 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.68■□□□□ 0.42
ShdO88834 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.68■□□□□ 0.42
ShdO88834 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
ShdO88834 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.68■□□□□ 0.42
ShdO88834 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
ShdO88834 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ShdO88834 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.68■□□□□ 0.42
ShdO88834 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ShdO88834 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
ShdO88834 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.67■□□□□ 0.42
ShdO88834 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.67■□□□□ 0.42
ShdO88834 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
ShdO88834 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.67■□□□□ 0.42
ShdO88834 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ShdO88834 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ShdO88834 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.67■□□□□ 0.42
ShdO88834 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ShdO88834 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Gm24841-201ENSMUST00000158676 357 ntBASIC17.66■□□□□ 0.42
ShdO88834 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.66■□□□□ 0.42
ShdO88834 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.66■□□□□ 0.42
ShdO88834 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.66■□□□□ 0.42
ShdO88834 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ShdO88834 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ShdO88834 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
ShdO88834 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ShdO88834 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.65■□□□□ 0.42
ShdO88834 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShdO88834 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ShdO88834 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShdO88834 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ShdO88834 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShdO88834 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.65■□□□□ 0.42
ShdO88834 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ShdO88834 Gm10252-201ENSMUST00000209541 832 ntBASIC17.65■□□□□ 0.42
ShdO88834 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ShdO88834 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ShdO88834 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ShdO88834 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShdO88834 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ShdO88834 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.65■□□□□ 0.42
ShdO88834 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ShdO88834 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.64■□□□□ 0.42
ShdO88834 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ShdO88834 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ShdO88834 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.64■□□□□ 0.41
ShdO88834 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.64■□□□□ 0.41
ShdO88834 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.64■□□□□ 0.41
ShdO88834 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.64■□□□□ 0.41
ShdO88834 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ShdO88834 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms