Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.86■□□□□ 0.29
ClppO88696 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.86■□□□□ 0.29
ClppO88696 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
ClppO88696 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ClppO88696 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
ClppO88696 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ClppO88696 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.85■□□□□ 0.29
ClppO88696 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ClppO88696 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.85■□□□□ 0.29
ClppO88696 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ClppO88696 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.84■□□□□ 0.29
ClppO88696 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClppO88696 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClppO88696 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.84■□□□□ 0.29
ClppO88696 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClppO88696 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.84■□□□□ 0.29
ClppO88696 Gm10231-201ENSMUST00000181584 441 ntBASIC16.84■□□□□ 0.29
ClppO88696 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClppO88696 Gm10175-202ENSMUST00000208752 441 ntBASIC16.84■□□□□ 0.29
ClppO88696 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClppO88696 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClppO88696 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClppO88696 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ClppO88696 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.84■□□□□ 0.29
ClppO88696 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.84■□□□□ 0.29
ClppO88696 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ClppO88696 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.84■□□□□ 0.29
ClppO88696 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ClppO88696 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.83■□□□□ 0.28
ClppO88696 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.83■□□□□ 0.28
ClppO88696 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ClppO88696 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ClppO88696 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClppO88696 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.82■□□□□ 0.28
ClppO88696 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ClppO88696 Gm13559-201ENSMUST00000120476 863 ntBASIC16.82■□□□□ 0.28
ClppO88696 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.82■□□□□ 0.28
ClppO88696 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.82■□□□□ 0.28
ClppO88696 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ClppO88696 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ClppO88696 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.82■□□□□ 0.28
ClppO88696 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.82■□□□□ 0.28
ClppO88696 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClppO88696 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms