Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc4a4O88343 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc4a4O88343 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Slc4a4O88343 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc4a4O88343 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc4a4O88343 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc4a4O88343 Gm17661-201ENSMUST00000170317 270 ntBASIC20.45■□□□□ 0.86
Slc4a4O88343 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc4a4O88343 Il3ra-202ENSMUST00000223589 738 ntBASIC20.45■□□□□ 0.86
Slc4a4O88343 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Slc4a4O88343 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Slc4a4O88343 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Slc4a4O88343 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Slc4a4O88343 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc4a4O88343 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slc4a4O88343 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.45■□□□□ 0.86
Slc4a4O88343 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc4a4O88343 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slc4a4O88343 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Slc4a4O88343 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc4a4O88343 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Slc4a4O88343 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.44■□□□□ 0.86
Slc4a4O88343 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.44■□□□□ 0.86
Slc4a4O88343 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slc4a4O88343 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc4a4O88343 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc4a4O88343 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc4a4O88343 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc4a4O88343 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slc4a4O88343 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc4a4O88343 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Slc4a4O88343 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc4a4O88343 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc4a4O88343 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.43■□□□□ 0.86
Slc4a4O88343 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slc4a4O88343 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.42■□□□□ 0.86
Slc4a4O88343 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Slc4a4O88343 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.42■□□□□ 0.86
Slc4a4O88343 Gm45058-201ENSMUST00000205810 766 ntBASIC20.42■□□□□ 0.86
Slc4a4O88343 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slc4a4O88343 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.42■□□□□ 0.86
Slc4a4O88343 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.41■□□□□ 0.86
Slc4a4O88343 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Slc4a4O88343 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.41■□□□□ 0.86
Slc4a4O88343 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Slc4a4O88343 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slc4a4O88343 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Slc4a4O88343 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.41■□□□□ 0.86
Slc4a4O88343 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.41■□□□□ 0.86
Slc4a4O88343 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.41■□□□□ 0.86
Slc4a4O88343 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.4■□□□□ 0.86
Slc4a4O88343 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Mir5130-201ENSMUST00000175160 84 ntBASIC20.4■□□□□ 0.86
Slc4a4O88343 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.4■□□□□ 0.86
Slc4a4O88343 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Gm7977-201ENSMUST00000193787 748 ntBASIC20.4■□□□□ 0.86
Slc4a4O88343 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Slc4a4O88343 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc4a4O88343 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc4a4O88343 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Slc4a4O88343 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc4a4O88343 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc4a4O88343 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Slc4a4O88343 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Slc4a4O88343 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.39■□□□□ 0.85
Slc4a4O88343 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc4a4O88343 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Slc4a4O88343 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Slc4a4O88343 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc4a4O88343 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms