Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Chrna4O70174 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.47■□□□□ 0.39
Chrna4O70174 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Chrna4O70174 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Chrna4O70174 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.47■□□□□ 0.39
Chrna4O70174 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Chrna4O70174 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Chrna4O70174 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chrna4O70174 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.47■□□□□ 0.39
Chrna4O70174 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna4O70174 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna4O70174 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna4O70174 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna4O70174 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.46■□□□□ 0.39
Chrna4O70174 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.46■□□□□ 0.39
Chrna4O70174 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.46■□□□□ 0.39
Chrna4O70174 Gm10812-201ENSMUST00000099864 546 ntBASIC17.46■□□□□ 0.39
Chrna4O70174 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna4O70174 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna4O70174 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna4O70174 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna4O70174 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna4O70174 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.46■□□□□ 0.38
Chrna4O70174 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chrna4O70174 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chrna4O70174 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Chrna4O70174 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chrna4O70174 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chrna4O70174 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.45■□□□□ 0.38
Chrna4O70174 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Chrna4O70174 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.45■□□□□ 0.38
Chrna4O70174 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna4O70174 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Gm12085-201ENSMUST00000119263 940 ntBASIC17.44■□□□□ 0.38
Chrna4O70174 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chrna4O70174 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.44■□□□□ 0.38
Chrna4O70174 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.44■□□□□ 0.38
Chrna4O70174 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Chrna4O70174 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.44■□□□□ 0.38
Chrna4O70174 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.44■□□□□ 0.38
Chrna4O70174 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna4O70174 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chrna4O70174 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna4O70174 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna4O70174 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna4O70174 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.43■□□□□ 0.38
Chrna4O70174 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Chrna4O70174 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.43■□□□□ 0.38
Chrna4O70174 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.43■□□□□ 0.38
Chrna4O70174 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.43■□□□□ 0.38
Chrna4O70174 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chrna4O70174 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna4O70174 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna4O70174 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.43■□□□□ 0.38
Chrna4O70174 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna4O70174 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chrna4O70174 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chrna4O70174 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chrna4O70174 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna4O70174 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna4O70174 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna4O70174 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.42■□□□□ 0.38
Chrna4O70174 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna4O70174 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna4O70174 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chrna4O70174 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms