Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.41■□□□□ 0.22
Rdh5O55240 Gm43183-201ENSMUST00000200632 547 ntBASIC16.41■□□□□ 0.22
Rdh5O55240 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.41■□□□□ 0.22
Rdh5O55240 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.41■□□□□ 0.22
Rdh5O55240 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.41■□□□□ 0.22
Rdh5O55240 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rdh5O55240 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rdh5O55240 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rdh5O55240 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.4■□□□□ 0.22
Rdh5O55240 Gm15378-201ENSMUST00000121894 207 ntBASIC16.4■□□□□ 0.22
Rdh5O55240 Gm10698-201ENSMUST00000182663 604 ntBASIC16.4■□□□□ 0.22
Rdh5O55240 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rdh5O55240 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Rdh5O55240 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Rdh5O55240 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh5O55240 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
Rdh5O55240 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rdh5O55240 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rdh5O55240 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rdh5O55240 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rdh5O55240 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.39■□□□□ 0.21
Rdh5O55240 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Rdh5O55240 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh5O55240 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.38■□□□□ 0.21
Rdh5O55240 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.38■□□□□ 0.21
Rdh5O55240 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Rdh5O55240 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Rdh5O55240 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.38■□□□□ 0.21
Rdh5O55240 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.38■□□□□ 0.21
Rdh5O55240 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Rdh5O55240 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh5O55240 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.38■□□□□ 0.21
Rdh5O55240 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rdh5O55240 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rdh5O55240 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rdh5O55240 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.37■□□□□ 0.21
Rdh5O55240 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rdh5O55240 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.37■□□□□ 0.21
Rdh5O55240 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh5O55240 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh5O55240 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms