Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Copb2O55029 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Copb2O55029 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Copb2O55029 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Copb2O55029 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Copb2O55029 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Copb2O55029 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Copb2O55029 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Copb2O55029 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.88■□□□□ 0.77
Copb2O55029 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Copb2O55029 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Copb2O55029 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Copb2O55029 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.87■□□□□ 0.77
Copb2O55029 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.87■□□□□ 0.77
Copb2O55029 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Copb2O55029 AA414768-201ENSMUST00000121924 1257 ntBASIC19.87■□□□□ 0.77
Copb2O55029 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Copb2O55029 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Copb2O55029 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Copb2O55029 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Copb2O55029 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Copb2O55029 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.87■□□□□ 0.77
Copb2O55029 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Copb2O55029 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Copb2O55029 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Copb2O55029 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Copb2O55029 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.87■□□□□ 0.77
Copb2O55029 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Copb2O55029 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Copb2O55029 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.86■□□□□ 0.77
Copb2O55029 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.86■□□□□ 0.77
Copb2O55029 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Copb2O55029 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Copb2O55029 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Copb2O55029 Gm21362-201ENSMUST00000194272 928 ntBASIC19.86■□□□□ 0.77
Copb2O55029 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Copb2O55029 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Copb2O55029 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Copb2O55029 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Copb2O55029 Rarb-207ENSMUST00000225921 2756 ntBASIC19.86■□□□□ 0.77
Copb2O55029 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.86■□□□□ 0.77
Copb2O55029 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Copb2O55029 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Copb2O55029 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Gm13474-201ENSMUST00000122466 815 ntBASIC19.85■□□□□ 0.77
Copb2O55029 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Copb2O55029 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.85■□□□□ 0.77
Copb2O55029 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Copb2O55029 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Copb2O55029 Gm6345-202ENSMUST00000180900 204 ntBASIC19.85■□□□□ 0.77
Copb2O55029 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.85■□□□□ 0.77
Copb2O55029 Gm7367-201ENSMUST00000057611 492 ntBASIC19.85■□□□□ 0.77
Copb2O55029 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Copb2O55029 Gm19721-201ENSMUST00000195284 1764 ntBASIC19.85■□□□□ 0.77
Copb2O55029 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb2O55029 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb2O55029 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb2O55029 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb2O55029 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.84■□□□□ 0.77
Copb2O55029 Gm17661-201ENSMUST00000170317 270 ntBASIC19.84■□□□□ 0.77
Copb2O55029 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Copb2O55029 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.84■□□□□ 0.77
Copb2O55029 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Copb2O55029 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb2O55029 Gm10819-201ENSMUST00000099988 561 ntBASIC19.84■□□□□ 0.77
Copb2O55029 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.84■□□□□ 0.77
Copb2O55029 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb2O55029 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Copb2O55029 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb2O55029 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb2O55029 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Copb2O55029 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Copb2O55029 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Copb2O55029 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Copb2O55029 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Copb2O55029 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.83■□□□□ 0.77
Copb2O55029 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Copb2O55029 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Copb2O55029 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Copb2O55029 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.83■□□□□ 0.76
Copb2O55029 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Copb2O55029 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Copb2O55029 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Copb2O55029 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Copb2O55029 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb2O55029 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Copb2O55029 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Copb2O55029 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.82■□□□□ 0.76
Copb2O55029 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
Copb2O55029 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms