Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.72■□□□□ 0.11
Rnf13O54965 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Rnf13O54965 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.72■□□□□ 0.11
Rnf13O54965 Gm6365-201ENSMUST00000054711 744 ntBASIC15.72■□□□□ 0.11
Rnf13O54965 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rnf13O54965 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rnf13O54965 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Rnf13O54965 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf13O54965 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.71■□□□□ 0.11
Rnf13O54965 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
Rnf13O54965 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf13O54965 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.71■□□□□ 0.11
Rnf13O54965 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Rnf13O54965 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Rnf13O54965 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rnf13O54965 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf13O54965 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf13O54965 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.71■□□□□ 0.1
Rnf13O54965 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rnf13O54965 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf13O54965 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Rnf13O54965 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.7■□□□□ 0.1
Rnf13O54965 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf13O54965 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rnf13O54965 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC15.7■□□□□ 0.1
Rnf13O54965 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.7■□□□□ 0.1
Rnf13O54965 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.7■□□□□ 0.1
Rnf13O54965 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.7■□□□□ 0.1
Rnf13O54965 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Rnf13O54965 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rnf13O54965 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Rnf13O54965 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Rnf13O54965 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.69■□□□□ 0.1
Rnf13O54965 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.69■□□□□ 0.1
Rnf13O54965 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Rnf13O54965 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rnf13O54965 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.69■□□□□ 0.1
Rnf13O54965 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf13O54965 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf13O54965 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf13O54965 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf13O54965 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf13O54965 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.68■□□□□ 0.1
Rnf13O54965 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf13O54965 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf13O54965 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Rnf13O54965 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rnf13O54965 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms