Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Itgb3O54890 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Itgb3O54890 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Itgb3O54890 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.37■□□□□ 0.53
Itgb3O54890 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Itgb3O54890 Gm2274-201ENSMUST00000184539 609 ntBASIC18.37■□□□□ 0.53
Itgb3O54890 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.37■□□□□ 0.53
Itgb3O54890 Gm18959-201ENSMUST00000208954 655 ntBASIC18.37■□□□□ 0.53
Itgb3O54890 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Itgb3O54890 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Itgb3O54890 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.37■□□□□ 0.53
Itgb3O54890 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Itgb3O54890 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itgb3O54890 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itgb3O54890 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Itgb3O54890 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Itgb3O54890 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.36■□□□□ 0.53
Itgb3O54890 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.36■□□□□ 0.53
Itgb3O54890 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itgb3O54890 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itgb3O54890 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itgb3O54890 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itgb3O54890 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Itgb3O54890 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Itgb3O54890 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb3O54890 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.35■□□□□ 0.53
Itgb3O54890 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb3O54890 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb3O54890 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.35■□□□□ 0.53
Itgb3O54890 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Itgb3O54890 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb3O54890 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb3O54890 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
Itgb3O54890 Gm17661-201ENSMUST00000170317 270 ntBASIC18.35■□□□□ 0.53
Itgb3O54890 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb3O54890 Il3ra-202ENSMUST00000223589 738 ntBASIC18.35■□□□□ 0.53
Itgb3O54890 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb3O54890 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Itgb3O54890 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb3O54890 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.34■□□□□ 0.53
Itgb3O54890 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Itgb3O54890 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.34■□□□□ 0.53
Itgb3O54890 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Itgb3O54890 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Itgb3O54890 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb3O54890 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Itgb3O54890 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Itgb3O54890 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Itgb3O54890 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Itgb3O54890 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.33■□□□□ 0.52
Itgb3O54890 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Itgb3O54890 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.33■□□□□ 0.52
Itgb3O54890 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.33■□□□□ 0.52
Itgb3O54890 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.33■□□□□ 0.52
Itgb3O54890 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Itgb3O54890 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.33■□□□□ 0.52
Itgb3O54890 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.32■□□□□ 0.52
Itgb3O54890 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.32■□□□□ 0.52
Itgb3O54890 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Gm45058-201ENSMUST00000205810 766 ntBASIC18.32■□□□□ 0.52
Itgb3O54890 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.32■□□□□ 0.52
Itgb3O54890 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.32■□□□□ 0.52
Itgb3O54890 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.32■□□□□ 0.52
Itgb3O54890 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb3O54890 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.31■□□□□ 0.52
Itgb3O54890 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Itgb3O54890 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.31■□□□□ 0.52
Itgb3O54890 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.31■□□□□ 0.52
Itgb3O54890 Mir5130-201ENSMUST00000175160 84 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms