Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.5■□□□□ 0.39
ChkaO54804 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.5■□□□□ 0.39
ChkaO54804 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Gm27275-201ENSMUST00000184318 272 ntBASIC17.5■□□□□ 0.39
ChkaO54804 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ChkaO54804 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.5■□□□□ 0.39
ChkaO54804 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ChkaO54804 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ChkaO54804 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ChkaO54804 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.49■□□□□ 0.39
ChkaO54804 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
ChkaO54804 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ChkaO54804 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.49■□□□□ 0.39
ChkaO54804 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ChkaO54804 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ChkaO54804 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ChkaO54804 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ChkaO54804 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ChkaO54804 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ChkaO54804 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ChkaO54804 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ChkaO54804 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ChkaO54804 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ChkaO54804 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.47■□□□□ 0.39
ChkaO54804 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Gm12527-201ENSMUST00000117967 564 ntBASIC17.47■□□□□ 0.39
ChkaO54804 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.47■□□□□ 0.39
ChkaO54804 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ChkaO54804 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.46■□□□□ 0.39
ChkaO54804 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.46■□□□□ 0.39
ChkaO54804 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ChkaO54804 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ChkaO54804 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.46■□□□□ 0.38
ChkaO54804 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkaO54804 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkaO54804 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkaO54804 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ChkaO54804 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.45■□□□□ 0.38
ChkaO54804 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkaO54804 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ChkaO54804 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ChkaO54804 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ChkaO54804 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.45■□□□□ 0.38
ChkaO54804 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.45■□□□□ 0.38
ChkaO54804 Gm12441-201ENSMUST00000121806 588 ntBASIC17.45■□□□□ 0.38
ChkaO54804 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms