Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Phox2bO35690 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Phox2bO35690 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Phox2bO35690 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Phox2bO35690 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Phox2bO35690 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.33■□□□□ 0.36
Phox2bO35690 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.33■□□□□ 0.36
Phox2bO35690 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.33■□□□□ 0.36
Phox2bO35690 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Phox2bO35690 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.33■□□□□ 0.36
Phox2bO35690 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.33■□□□□ 0.36
Phox2bO35690 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Phox2bO35690 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Phox2bO35690 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Phox2bO35690 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Phox2bO35690 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Phox2bO35690 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.32■□□□□ 0.36
Phox2bO35690 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.32■□□□□ 0.36
Phox2bO35690 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.32■□□□□ 0.36
Phox2bO35690 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Phox2bO35690 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.32■□□□□ 0.36
Phox2bO35690 AC159093.1-201ENSMUST00000227779 380 ntBASIC17.32■□□□□ 0.36
Phox2bO35690 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.32■□□□□ 0.36
Phox2bO35690 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Phox2bO35690 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Phox2bO35690 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Phox2bO35690 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.31■□□□□ 0.36
Phox2bO35690 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.31■□□□□ 0.36
Phox2bO35690 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Phox2bO35690 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.31■□□□□ 0.36
Phox2bO35690 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Phox2bO35690 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Phox2bO35690 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Phox2bO35690 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.3■□□□□ 0.36
Phox2bO35690 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Phox2bO35690 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Phox2bO35690 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.3■□□□□ 0.36
Phox2bO35690 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.3■□□□□ 0.36
Phox2bO35690 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Gm10576-201ENSMUST00000191927 825 ntBASIC17.3■□□□□ 0.36
Phox2bO35690 Gm2213-201ENSMUST00000197485 688 ntBASIC17.3■□□□□ 0.36
Phox2bO35690 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.3■□□□□ 0.36
Phox2bO35690 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Phox2bO35690 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Phox2bO35690 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.3■□□□□ 0.36
Phox2bO35690 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Phox2bO35690 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Phox2bO35690 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Phox2bO35690 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Phox2bO35690 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Gm10418-201ENSMUST00000100943 576 ntBASIC17.29■□□□□ 0.36
Phox2bO35690 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Phox2bO35690 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.29■□□□□ 0.36
Phox2bO35690 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.29■□□□□ 0.36
Phox2bO35690 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Phox2bO35690 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Phox2bO35690 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Phox2bO35690 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms