Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clk4O35493 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Clk4O35493 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.59■□□□□ 0.25
Clk4O35493 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Gm6576-201ENSMUST00000169678 883 ntBASIC16.59■□□□□ 0.25
Clk4O35493 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Clk4O35493 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.59■□□□□ 0.25
Clk4O35493 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clk4O35493 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clk4O35493 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clk4O35493 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clk4O35493 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clk4O35493 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.58■□□□□ 0.25
Clk4O35493 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.58■□□□□ 0.25
Clk4O35493 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.58■□□□□ 0.25
Clk4O35493 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Clk4O35493 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.58■□□□□ 0.24
Clk4O35493 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.58■□□□□ 0.24
Clk4O35493 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.58■□□□□ 0.24
Clk4O35493 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.58■□□□□ 0.24
Clk4O35493 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clk4O35493 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Clk4O35493 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.58■□□□□ 0.24
Clk4O35493 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.57■□□□□ 0.24
Clk4O35493 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.57■□□□□ 0.24
Clk4O35493 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clk4O35493 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.57■□□□□ 0.24
Clk4O35493 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Clk4O35493 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Clk4O35493 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Clk4O35493 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Clk4O35493 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Clk4O35493 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.56■□□□□ 0.24
Clk4O35493 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.56■□□□□ 0.24
Clk4O35493 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clk4O35493 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.56■□□□□ 0.24
Clk4O35493 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
Clk4O35493 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk4O35493 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk4O35493 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk4O35493 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clk4O35493 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms