Protein–RNA interactions for Protein: O35452

Tnxb, Tenascin X, mousemouse

Predictions only

Length 4,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnxbO35452 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnxbO35452 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.61□□□□□ -0.39
TnxbO35452 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
TnxbO35452 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnxbO35452 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.61□□□□□ -0.39
TnxbO35452 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
TnxbO35452 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnxbO35452 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnxbO35452 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
TnxbO35452 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Mir6420-201ENSMUST00000185032 102 ntBASIC12.6□□□□□ -0.39
TnxbO35452 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.6□□□□□ -0.39
TnxbO35452 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.6□□□□□ -0.39
TnxbO35452 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.6□□□□□ -0.39
TnxbO35452 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TnxbO35452 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TnxbO35452 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.6□□□□□ -0.39
TnxbO35452 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.6□□□□□ -0.39
TnxbO35452 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
TnxbO35452 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TnxbO35452 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TnxbO35452 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.59□□□□□ -0.39
TnxbO35452 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.59□□□□□ -0.39
TnxbO35452 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.59□□□□□ -0.39
TnxbO35452 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
TnxbO35452 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TnxbO35452 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.59□□□□□ -0.39
TnxbO35452 Mir3113-201ENSMUST00000175478 76 ntBASIC12.59□□□□□ -0.39
TnxbO35452 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.59□□□□□ -0.39
TnxbO35452 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Tgds-204ENSMUST00000228543 1594 ntBASIC12.59□□□□□ -0.39
TnxbO35452 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TnxbO35452 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
TnxbO35452 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.59□□□□□ -0.39
TnxbO35452 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.59□□□□□ -0.39
TnxbO35452 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.59□□□□□ -0.39
TnxbO35452 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.59□□□□□ -0.39
TnxbO35452 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.59□□□□□ -0.39
TnxbO35452 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.59□□□□□ -0.39
TnxbO35452 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TnxbO35452 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TnxbO35452 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TnxbO35452 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
TnxbO35452 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.58□□□□□ -0.4
TnxbO35452 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.58□□□□□ -0.4
TnxbO35452 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 Gm25857-201ENSMUST00000082788 129 ntBASIC12.58□□□□□ -0.4
TnxbO35452 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TnxbO35452 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 Golph3-202ENSMUST00000226517 2359 ntBASIC12.58□□□□□ -0.4
TnxbO35452 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.58□□□□□ -0.4
TnxbO35452 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.58□□□□□ -0.4
TnxbO35452 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 Gm13823-201ENSMUST00000119930 345 ntBASIC12.58□□□□□ -0.4
TnxbO35452 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.58□□□□□ -0.4
TnxbO35452 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TnxbO35452 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TnxbO35452 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnxbO35452 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnxbO35452 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnxbO35452 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnxbO35452 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TnxbO35452 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnxbO35452 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnxbO35452 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TnxbO35452 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms