Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ebf3O08791 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Gm22697-201ENSMUST00000175194 63 ntBASIC17.95■□□□□ 0.46
Ebf3O08791 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.95■□□□□ 0.46
Ebf3O08791 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.95■□□□□ 0.46
Ebf3O08791 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ebf3O08791 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ebf3O08791 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Ebf3O08791 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Gm33142-201ENSMUST00000193913 867 ntBASIC17.94■□□□□ 0.46
Ebf3O08791 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Gm18101-201ENSMUST00000215769 548 ntBASIC17.94■□□□□ 0.46
Ebf3O08791 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.94■□□□□ 0.46
Ebf3O08791 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ebf3O08791 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Ebf3O08791 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ebf3O08791 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.93■□□□□ 0.46
Ebf3O08791 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.93■□□□□ 0.46
Ebf3O08791 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.93■□□□□ 0.46
Ebf3O08791 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
Ebf3O08791 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ebf3O08791 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ebf3O08791 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ebf3O08791 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.92■□□□□ 0.46
Ebf3O08791 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ebf3O08791 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ebf3O08791 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ebf3O08791 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ebf3O08791 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ebf3O08791 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ebf3O08791 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ebf3O08791 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.92■□□□□ 0.46
Ebf3O08791 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.91■□□□□ 0.46
Ebf3O08791 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ebf3O08791 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.91■□□□□ 0.46
Ebf3O08791 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.91■□□□□ 0.46
Ebf3O08791 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ebf3O08791 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ebf3O08791 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Ebf3O08791 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Ebf3O08791 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Gm13401-201ENSMUST00000117074 291 ntBASIC17.9■□□□□ 0.46
Ebf3O08791 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.9■□□□□ 0.46
Ebf3O08791 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.9■□□□□ 0.46
Ebf3O08791 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.9■□□□□ 0.46
Ebf3O08791 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ebf3O08791 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ebf3O08791 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms