Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Dctn1O08788 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Dctn1O08788 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Dctn1O08788 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Dctn1O08788 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.37■■□□□ 1.01
Dctn1O08788 Grk6-206ENSMUST00000224995 2971 ntBASIC21.36■■□□□ 1.01
Dctn1O08788 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Dctn1O08788 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC21.36■■□□□ 1.01
Dctn1O08788 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Dctn1O08788 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Dctn1O08788 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Dctn1O08788 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Dctn1O08788 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dctn1O08788 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dctn1O08788 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Dctn1O08788 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dctn1O08788 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Dctn1O08788 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Dctn1O08788 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dctn1O08788 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Dctn1O08788 Mir770-201ENSMUST00000103252 94 ntBASIC21.35■■□□□ 1.01
Dctn1O08788 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Dctn1O08788 Gm6623-201ENSMUST00000173570 544 ntBASIC21.35■■□□□ 1.01
Dctn1O08788 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC21.35■■□□□ 1.01
Dctn1O08788 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Dctn1O08788 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.35■■□□□ 1.01
Dctn1O08788 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Dctn1O08788 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Dctn1O08788 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Dctn1O08788 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC21.34■■□□□ 1.01
Dctn1O08788 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dctn1O08788 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dctn1O08788 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC21.34■■□□□ 1.01
Dctn1O08788 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.34■■□□□ 1.01
Dctn1O08788 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dctn1O08788 Gm37722-201ENSMUST00000193757 208 ntBASIC21.34■■□□□ 1.01
Dctn1O08788 Otx2os1-206ENSMUST00000228153 787 ntBASIC21.34■■□□□ 1.01
Dctn1O08788 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dctn1O08788 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dctn1O08788 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Dctn1O08788 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
Dctn1O08788 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dctn1O08788 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Dctn1O08788 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dctn1O08788 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dctn1O08788 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dctn1O08788 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dctn1O08788 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dctn1O08788 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Dctn1O08788 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dctn1O08788 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Dctn1O08788 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC21.33■■□□□ 1.01
Dctn1O08788 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Dctn1O08788 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Dctn1O08788 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Dctn1O08788 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Dctn1O08788 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Dctn1O08788 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Dctn1O08788 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC21.32■■□□□ 1
Dctn1O08788 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.32■■□□□ 1
Dctn1O08788 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Dctn1O08788 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Dctn1O08788 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.32■■□□□ 1
Dctn1O08788 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC21.32■■□□□ 1
Dctn1O08788 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.32■■□□□ 1
Dctn1O08788 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dctn1O08788 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.32■■□□□ 1
Dctn1O08788 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dctn1O08788 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.31■■□□□ 1
Dctn1O08788 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC21.31■■□□□ 1
Dctn1O08788 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dctn1O08788 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.31■■□□□ 1
Dctn1O08788 Mir3081-201ENSMUST00000175305 84 ntBASIC21.31■■□□□ 1
Dctn1O08788 Gm27742-201ENSMUST00000184667 60 ntBASIC21.31■■□□□ 1
Dctn1O08788 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.31■■□□□ 1
Dctn1O08788 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC21.31■■□□□ 1
Dctn1O08788 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dctn1O08788 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Dctn1O08788 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dctn1O08788 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC21.31■■□□□ 1
Dctn1O08788 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Dctn1O08788 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dctn1O08788 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.31■■□□□ 1
Dctn1O08788 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dctn1O08788 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Dctn1O08788 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dctn1O08788 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Dctn1O08788 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Dctn1O08788 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.3■■□□□ 1
Dctn1O08788 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Dctn1O08788 Mir8112-201ENSMUST00000184382 131 ntBASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms