Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Gm13186-201ENSMUST00000118031 316 ntBASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC31.54■■■□□ 2.64
Ccdc180J3QNE4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Mzt1-203ENSMUST00000227948 952 ntBASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Birc2-201ENSMUST00000054878 378 ntBASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Ccdc180J3QNE4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
Ccdc180J3QNE4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ccdc180J3QNE4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ccdc180J3QNE4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Ccdc180J3QNE4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
Ccdc180J3QNE4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
Ccdc180J3QNE4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC31.51■■■□□ 2.64
Ccdc180J3QNE4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Ccdc180J3QNE4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
Ccdc180J3QNE4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Ccdc180J3QNE4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Ccdc180J3QNE4 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
Ccdc180J3QNE4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Ccdc180J3QNE4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Ccdc180J3QNE4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Ccdc180J3QNE4 Gm5828-201ENSMUST00000071842 1860 ntBASIC31.5■■■□□ 2.63
Ccdc180J3QNE4 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Ccdc180J3QNE4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ccdc180J3QNE4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC31.5■■■□□ 2.63
Ccdc180J3QNE4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC31.5■■■□□ 2.63
Ccdc180J3QNE4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ccdc180J3QNE4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Ccdc180J3QNE4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Ccdc180J3QNE4 Gm43182-201ENSMUST00000199476 2528 ntBASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 Grk6-206ENSMUST00000224995 2971 ntBASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
Ccdc180J3QNE4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc180J3QNE4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc180J3QNE4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc180J3QNE4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc180J3QNE4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc180J3QNE4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Ccdc180J3QNE4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC31.48■■■□□ 2.63
Ccdc180J3QNE4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC31.48■■■□□ 2.63
Ccdc180J3QNE4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
Ccdc180J3QNE4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ccdc180J3QNE4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ccdc180J3QNE4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ccdc180J3QNE4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC31.47■■■□□ 2.63
Ccdc180J3QNE4 Gm44450-201ENSMUST00000199528 114 ntBASIC31.47■■■□□ 2.63
Ccdc180J3QNE4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Ccdc180J3QNE4 Gm6190-201ENSMUST00000220683 1374 ntBASIC31.47■■■□□ 2.63
Ccdc180J3QNE4 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccdc180J3QNE4 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
Ccdc180J3QNE4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Ccdc180J3QNE4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC31.46■■■□□ 2.63
Ccdc180J3QNE4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
Ccdc180J3QNE4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccdc180J3QNE4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Ccdc180J3QNE4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ccdc180J3QNE4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Ccdc180J3QNE4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Gm15372-201ENSMUST00000120729 834 ntBASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Ccdc180J3QNE4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms