Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pcdh11xF6ZNL5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pcdh11xF6ZNL5 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pcdh11xF6ZNL5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pcdh11xF6ZNL5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pcdh11xF6ZNL5 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.1■□□□□ 0.65
Pcdh11xF6ZNL5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdh11xF6ZNL5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh11xF6ZNL5 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms