Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Gm45058-201ENSMUST00000205810 766 ntBASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Gm7370-201ENSMUST00000219471 767 ntBASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdhb9E9Q5G2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdhb9E9Q5G2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb9E9Q5G2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pcdhb9E9Q5G2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb9E9Q5G2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb9E9Q5G2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdhb9E9Q5G2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb9E9Q5G2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Pcdhb9E9Q5G2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdhb9E9Q5G2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.36■□□□□ 0.85
Pcdhb9E9Q5G2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Mir5130-201ENSMUST00000175160 84 ntBASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhb9E9Q5G2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb9E9Q5G2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb9E9Q5G2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb9E9Q5G2 Gm16061-201ENSMUST00000122167 857 ntBASIC20.34■□□□□ 0.85
Pcdhb9E9Q5G2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhb9E9Q5G2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb9E9Q5G2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhb9E9Q5G2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb9E9Q5G2 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.34■□□□□ 0.85
Pcdhb9E9Q5G2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdhb9E9Q5G2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb9E9Q5G2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb9E9Q5G2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb9E9Q5G2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhb9E9Q5G2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb9E9Q5G2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb9E9Q5G2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb9E9Q5G2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms