Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Gm28043E0CXC2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Gm28043E0CXC2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm28043E0CXC2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.35■□□□□ 0.37
Gm28043E0CXC2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Gm2399-201ENSMUST00000104944 225 ntBASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.34■□□□□ 0.37
Gm28043E0CXC2 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm28043E0CXC2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.33■□□□□ 0.37
Gm28043E0CXC2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28043E0CXC2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28043E0CXC2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Gm28043E0CXC2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28043E0CXC2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28043E0CXC2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm28043E0CXC2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms