Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp42B2RQC2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.25■□□□□ 0.83
Usp42B2RQC2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp42B2RQC2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp42B2RQC2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp42B2RQC2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp42B2RQC2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.24■□□□□ 0.83
Usp42B2RQC2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.24■□□□□ 0.83
Usp42B2RQC2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.24■□□□□ 0.83
Usp42B2RQC2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.23■□□□□ 0.83
Usp42B2RQC2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Usp42B2RQC2 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Gm5898-201ENSMUST00000121016 2071 ntBASIC20.22■□□□□ 0.83
Usp42B2RQC2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp42B2RQC2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Usp42B2RQC2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.21■□□□□ 0.83
Usp42B2RQC2 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.21■□□□□ 0.83
Usp42B2RQC2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Usp42B2RQC2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.2■□□□□ 0.82
Usp42B2RQC2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.2■□□□□ 0.82
Usp42B2RQC2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.2■□□□□ 0.82
Usp42B2RQC2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.2■□□□□ 0.82
Usp42B2RQC2 Gm30025-201ENSMUST00000218555 728 ntBASIC20.2■□□□□ 0.82
Usp42B2RQC2 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp42B2RQC2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp42B2RQC2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms