Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Gm13534-201ENSMUST00000121169 513 ntBASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm12887B1AVM1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm12887B1AVM1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm12887B1AVM1 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Gm12887B1AVM1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Dancr-204ENSMUST00000132389 2347 ntBASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Gm12887B1AVM1 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms