Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.97■□□□□ 0.31
Chd3B1AR17 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.97■□□□□ 0.31
Chd3B1AR17 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chd3B1AR17 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Chd3B1AR17 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.96■□□□□ 0.31
Chd3B1AR17 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Chd3B1AR17 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chd3B1AR17 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.95■□□□□ 0.3
Chd3B1AR17 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.95■□□□□ 0.3
Chd3B1AR17 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 Gm10566-201ENSMUST00000086739 996 ntBASIC16.95■□□□□ 0.3
Chd3B1AR17 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chd3B1AR17 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chd3B1AR17 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chd3B1AR17 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Chd3B1AR17 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.95■□□□□ 0.3
Chd3B1AR17 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Chd3B1AR17 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.95■□□□□ 0.3
Chd3B1AR17 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 Gm10819-201ENSMUST00000099988 561 ntBASIC16.95■□□□□ 0.3
Chd3B1AR17 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.95■□□□□ 0.3
Chd3B1AR17 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd3B1AR17 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.94■□□□□ 0.3
Chd3B1AR17 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.94■□□□□ 0.3
Chd3B1AR17 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Chd3B1AR17 Gm13474-201ENSMUST00000122466 815 ntBASIC16.94■□□□□ 0.3
Chd3B1AR17 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.94■□□□□ 0.3
Chd3B1AR17 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.94■□□□□ 0.3
Chd3B1AR17 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chd3B1AR17 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd3B1AR17 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.93■□□□□ 0.3
Chd3B1AR17 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.93■□□□□ 0.3
Chd3B1AR17 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Chd3B1AR17 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.93■□□□□ 0.3
Chd3B1AR17 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.93■□□□□ 0.3
Chd3B1AR17 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd3B1AR17 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Chd3B1AR17 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd3B1AR17 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd3B1AR17 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd3B1AR17 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
Chd3B1AR17 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd3B1AR17 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd3B1AR17 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Chd3B1AR17 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chd3B1AR17 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.92■□□□□ 0.3
Chd3B1AR17 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd3B1AR17 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd3B1AR17 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Chd3B1AR17 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chd3B1AR17 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Chd3B1AR17 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chd3B1AR17 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.91■□□□□ 0.3
Chd3B1AR17 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.91■□□□□ 0.3
Chd3B1AR17 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Chd3B1AR17 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms