Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a4A2AX52 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a4A2AX52 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a4A2AX52 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.56□□□□□ -0.08
Col6a4A2AX52 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a4A2AX52 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a4A2AX52 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a4A2AX52 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.55□□□□□ -0.08
Col6a4A2AX52 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a4A2AX52 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Gm37722-201ENSMUST00000193757 208 ntBASIC14.54□□□□□ -0.08
Col6a4A2AX52 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.54□□□□□ -0.08
Col6a4A2AX52 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Gm15794-201ENSMUST00000120182 631 ntBASIC14.54□□□□□ -0.08
Col6a4A2AX52 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.54□□□□□ -0.08
Col6a4A2AX52 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.54□□□□□ -0.08
Col6a4A2AX52 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a4A2AX52 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col6a4A2AX52 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Col6a4A2AX52 Gm28659-201ENSMUST00000188013 759 ntBASIC14.53□□□□□ -0.08
Col6a4A2AX52 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a4A2AX52 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a4A2AX52 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a4A2AX52 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col6a4A2AX52 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a4A2AX52 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.53□□□□□ -0.08
Col6a4A2AX52 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.53□□□□□ -0.08
Col6a4A2AX52 Gm24841-201ENSMUST00000158676 357 ntBASIC14.53□□□□□ -0.08
Col6a4A2AX52 Gm37025-201ENSMUST00000195159 829 ntBASIC14.53□□□□□ -0.08
Col6a4A2AX52 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a4A2AX52 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a4A2AX52 Gm9885-202ENSMUST00000186234 2209 ntBASIC14.52□□□□□ -0.08
Col6a4A2AX52 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.52□□□□□ -0.08
Col6a4A2AX52 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a4A2AX52 Gm43006-201ENSMUST00000197702 1602 ntBASIC14.52□□□□□ -0.09
Col6a4A2AX52 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a4A2AX52 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a4A2AX52 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a4A2AX52 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a4A2AX52 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.52□□□□□ -0.09
Col6a4A2AX52 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.52□□□□□ -0.09
Col6a4A2AX52 Il3ra-202ENSMUST00000223589 738 ntBASIC14.52□□□□□ -0.09
Col6a4A2AX52 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a4A2AX52 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.52□□□□□ -0.09
Col6a4A2AX52 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a4A2AX52 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a4A2AX52 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a4A2AX52 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms