Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.75■□□□□ 0.43
Tubb1A2AQ07 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tubb1A2AQ07 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Trmt13-210ENSMUST00000198454 880 ntBASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tubb1A2AQ07 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tubb1A2AQ07 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tubb1A2AQ07 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Gm43183-201ENSMUST00000200632 547 ntBASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Tubb1A2AQ07 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Gm5643-201ENSMUST00000117081 966 ntBASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Gm18666-201ENSMUST00000190039 958 ntBASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.7■□□□□ 0.42
Tubb1A2AQ07 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.7■□□□□ 0.42
Tubb1A2AQ07 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Tubb1A2AQ07 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb1A2AQ07 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb1A2AQ07 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb1A2AQ07 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb1A2AQ07 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tubb1A2AQ07 Gm29257-201ENSMUST00000186115 639 ntBASIC17.69■□□□□ 0.42
Tubb1A2AQ07 Gm10517-202ENSMUST00000192970 758 ntBASIC17.69■□□□□ 0.42
Tubb1A2AQ07 Gm4974-201ENSMUST00000209974 875 ntBASIC17.69■□□□□ 0.42
Tubb1A2AQ07 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb1A2AQ07 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tubb1A2AQ07 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.69■□□□□ 0.42
Tubb1A2AQ07 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms