Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
IsxA1A546 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
IsxA1A546 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
IsxA1A546 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
IsxA1A546 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
IsxA1A546 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.12■□□□□ 0.17
IsxA1A546 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
IsxA1A546 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.12■□□□□ 0.17
IsxA1A546 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
IsxA1A546 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
IsxA1A546 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
IsxA1A546 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.11■□□□□ 0.17
IsxA1A546 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
IsxA1A546 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
IsxA1A546 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IsxA1A546 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IsxA1A546 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.1■□□□□ 0.17
IsxA1A546 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IsxA1A546 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IsxA1A546 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IsxA1A546 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.1■□□□□ 0.17
IsxA1A546 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.1■□□□□ 0.17
IsxA1A546 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.1■□□□□ 0.17
IsxA1A546 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IsxA1A546 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IsxA1A546 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
IsxA1A546 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IsxA1A546 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
IsxA1A546 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Gm27801-201ENSMUST00000184174 223 ntBASIC16.09■□□□□ 0.17
IsxA1A546 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.09■□□□□ 0.17
IsxA1A546 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
IsxA1A546 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IsxA1A546 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
IsxA1A546 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
IsxA1A546 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
IsxA1A546 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
IsxA1A546 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IsxA1A546 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.08■□□□□ 0.17
IsxA1A546 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IsxA1A546 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
IsxA1A546 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IsxA1A546 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.08■□□□□ 0.16
IsxA1A546 Smad6-203ENSMUST00000179458 273 ntBASIC16.08■□□□□ 0.16
IsxA1A546 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
IsxA1A546 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IsxA1A546 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
IsxA1A546 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IsxA1A546 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
IsxA1A546 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IsxA1A546 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.08■□□□□ 0.16
IsxA1A546 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
IsxA1A546 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
IsxA1A546 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms