Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm11643-201ENSMUST00000119578 864 ntBASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm10698-201ENSMUST00000182663 604 ntBASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm37292-201ENSMUST00000192062 758 ntBASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm8969-201ENSMUST00000199694 526 ntBASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lnp1A0A1B0GSK3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm27011-201ENSMUST00000182352 972 ntBASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.42□□□□□ -0.1
Lnp1A0A1B0GSK3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lnp1A0A1B0GSK3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm20760-201ENSMUST00000179197 648 ntBASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm43183-201ENSMUST00000200632 547 ntBASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lnp1A0A1B0GSK3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms