Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.74■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Gm45058-201ENSMUST00000205810 766 ntBASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tcrg-V3A0A0G2JEW2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Mir5130-201ENSMUST00000175160 84 ntBASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Gm8969-201ENSMUST00000199694 526 ntBASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Gm16061-201ENSMUST00000122167 857 ntBASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tcrg-V3A0A0G2JEW2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms