Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trbv16A0A0B4J1H3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm13401-201ENSMUST00000117074 291 ntBASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm11643-201ENSMUST00000119578 864 ntBASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trbv16A0A0B4J1H3 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm26524-201ENSMUST00000192339 390 ntBASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trbv16A0A0B4J1H3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm13216-201ENSMUST00000117145 591 ntBASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Mir6349-201ENSMUST00000184059 97 ntBASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trbv16A0A0B4J1H3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.53□□□□□ -0.4
Trbv16A0A0B4J1H3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms