Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Mir8112-201ENSMUST00000184382 131 ntBASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-4A0A075B6B4 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Mir1199-201ENSMUST00000117015 119 ntBASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-4A0A075B6B4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-4A0A075B6B4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.33□□□□□ -0.27
Trav6-4A0A075B6B4 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-4A0A075B6B4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6-4A0A075B6B4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trav6-4A0A075B6B4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-4A0A075B6B4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-4A0A075B6B4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms