Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav18A0A075B656 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Trav18A0A075B656 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.21□□□□□ -0.14
Trav18A0A075B656 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav18A0A075B656 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.2□□□□□ -0.14
Trav18A0A075B656 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.2□□□□□ -0.14
Trav18A0A075B656 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav18A0A075B656 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav18A0A075B656 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.19□□□□□ -0.14
Trav18A0A075B656 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.19□□□□□ -0.14
Trav18A0A075B656 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.19□□□□□ -0.14
Trav18A0A075B656 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.19□□□□□ -0.14
Trav18A0A075B656 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav18A0A075B656 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.18□□□□□ -0.14
Trav18A0A075B656 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav18A0A075B656 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav18A0A075B656 Gm37179-201ENSMUST00000194862 823 ntBASIC14.17□□□□□ -0.14
Trav18A0A075B656 Gm4968-201ENSMUST00000071458 858 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms