Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm24841-201ENSMUST00000158676 357 ntBASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trbv4A0A075B5I2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trbv4A0A075B5I2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trbv4A0A075B5I2 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trbv4A0A075B5I2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv4A0A075B5I2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv4A0A075B5I2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.33■□□□□ 0.37
Trbv4A0A075B5I2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trbv4A0A075B5I2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trbv4A0A075B5I2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.33■□□□□ 0.36
Trbv4A0A075B5I2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Gm13168-201ENSMUST00000121771 632 ntBASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trbv4A0A075B5I2 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms