Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
H2afb1S4R1E0 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Mir134-201ENSMUST00000083492 71 ntBASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Gm43260-201ENSMUST00000197378 2430 ntBASIC3.48□□□□□ -1.85
H2afb1S4R1E0 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Mir582-201ENSMUST00000103758 81 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm6429-201ENSMUST00000117144 475 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm15854-201ENSMUST00000118879 808 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm23591-201ENSMUST00000157663 286 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm7241-201ENSMUST00000159853 357 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm9613-201ENSMUST00000171662 196 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm27828-201ENSMUST00000184108 119 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm38098-201ENSMUST00000194115 241 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm6776-201ENSMUST00000057752 900 ntBASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
H2afb1S4R1E0 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
H2afb1S4R1E0 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm14628-201ENSMUST00000117508 635 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm12994-201ENSMUST00000119601 447 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm11931-201ENSMUST00000121630 447 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm24517-201ENSMUST00000122560 107 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm23505-201ENSMUST00000158989 130 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm21241-201ENSMUST00000179551 934 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm18667-201ENSMUST00000186523 484 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm29598-201ENSMUST00000188996 588 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm20871-201ENSMUST00000191322 931 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm42814-201ENSMUST00000199370 460 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm19131-201ENSMUST00000203408 789 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm45063-201ENSMUST00000203726 472 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm7468-201ENSMUST00000203900 652 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm17780-201ENSMUST00000207142 612 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm17766-201ENSMUST00000209223 442 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm9628-201ENSMUST00000222169 725 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.46□□□□□ -1.86
H2afb1S4R1E0 AC160958.1-201ENSMUST00000224833 368 ntBASIC3.46□□□□□ -1.86
H2afb1S4R1E0 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms