Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm37681-201ENSMUST00000193880 727 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm45616-201ENSMUST00000211711 319 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm21937-201ENSMUST00000222825 218 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm7768-201ENSMUST00000222988 597 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm9309-201ENSMUST00000223537 546 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Prpf40aQ9R1C7 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm13122-201ENSMUST00000118380 453 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm7327-201ENSMUST00000120925 652 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm11507-201ENSMUST00000156462 412 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm22842-201ENSMUST00000157709 118 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm16490-201ENSMUST00000165299 351 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm22911-201ENSMUST00000177920 107 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm9830-201ENSMUST00000178509 357 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Mir6539-201ENSMUST00000183732 110 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Mir7235-201ENSMUST00000183796 56 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Mir6417-201ENSMUST00000183815 116 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm2914-201ENSMUST00000186120 328 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm37568-201ENSMUST00000191755 364 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm23677-201ENSMUST00000083156 104 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm23451-201ENSMUST00000083328 122 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Mir452-201ENSMUST00000093629 85 ntBASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Prpf40aQ9R1C7 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm23910-201ENSMUST00000104597 132 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm14269-201ENSMUST00000120455 306 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 n-R5s80-201ENSMUST00000122596 111 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm3362-201ENSMUST00000148102 466 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm22059-201ENSMUST00000157544 104 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm24940-201ENSMUST00000158326 108 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm20526-201ENSMUST00000173416 158 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm37338-201ENSMUST00000191986 127 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm37746-201ENSMUST00000193249 198 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Mir691-201ENSMUST00000199719 78 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm43415-201ENSMUST00000201934 750 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm18320-201ENSMUST00000211304 595 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 AC154515.2-201ENSMUST00000226093 406 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Gm9577-201ENSMUST00000174655 2620 ntBASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Prpf40aQ9R1C7 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms