Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm26340-201ENSMUST00000102365 99 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm22284-201ENSMUST00000104132 132 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm12939-201ENSMUST00000117303 165 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm13455-201ENSMUST00000118767 517 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm11584-201ENSMUST00000120636 325 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm23982-201ENSMUST00000157141 106 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm24876-201ENSMUST00000158780 92 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Mir7212-201ENSMUST00000184098 61 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Trbv6-201ENSMUST00000193743 276 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm7626-201ENSMUST00000195801 353 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm9379-201ENSMUST00000196790 646 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm5552-201ENSMUST00000197149 515 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm44361-201ENSMUST00000197960 94 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm43233-201ENSMUST00000200491 616 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm44844-201ENSMUST00000207242 336 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 AC140785.1-201ENSMUST00000217782 383 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm7422-201ENSMUST00000220115 640 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Apoo-ps-201ENSMUST00000061241 586 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm25851-201ENSMUST00000082794 107 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Mir384-201ENSMUST00000083565 88 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm43887-201ENSMUST00000204727 3186 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.33□□□□□ -1.4
Msh5Q9QUM7 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Mir465b-1-201ENSMUST00000103940 79 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Mir465b-2-201ENSMUST00000104662 79 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 AA413626-201ENSMUST00000121125 494 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm24666-201ENSMUST00000158937 167 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm17187-201ENSMUST00000164622 410 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm43704-201ENSMUST00000196164 496 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm18600-201ENSMUST00000207205 505 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gm33601-201ENSMUST00000210001 961 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 AC148328.2-201ENSMUST00000216960 262 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.32□□□□□ -1.4
Msh5Q9QUM7 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Msh5Q9QUM7 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm43389-201ENSMUST00000196080 2595 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm14922-201ENSMUST00000121131 163 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm13618-201ENSMUST00000128859 384 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm22596-201ENSMUST00000157601 316 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm24010-201ENSMUST00000157731 282 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Mir1946a-201ENSMUST00000158360 134 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm25444-201ENSMUST00000158999 113 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm2619-202ENSMUST00000166777 651 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm17166-201ENSMUST00000172006 431 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm5283-201ENSMUST00000177874 334 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Ang-ps3-201ENSMUST00000177964 433 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm44463-201ENSMUST00000198895 137 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm45101-201ENSMUST00000208327 232 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm18617-201ENSMUST00000222311 259 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm33312-201ENSMUST00000222443 332 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm25409-201ENSMUST00000083764 131 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm24695-201ENSMUST00000083877 83 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 CT009757.5-201ENSMUST00000221858 3425 ntBASIC6.31□□□□□ -1.4
Msh5Q9QUM7 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Msh5Q9QUM7 Gm42635-201ENSMUST00000200266 2571 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms