Protein–RNA interactions for Protein: Q9QUK3

Cln8, Protein CLN8, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln8Q9QUK3 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm2092-201ENSMUST00000178887 639 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm2759-201ENSMUST00000179938 639 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Mir6385-201ENSMUST00000184295 105 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm37828-201ENSMUST00000192496 432 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm6680-201ENSMUST00000192789 950 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm37989-201ENSMUST00000195202 803 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm7034-201ENSMUST00000218638 645 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm8274-201ENSMUST00000219820 463 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Olfr1220-201ENSMUST00000099789 1026 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Olfr1220-202ENSMUST00000099806 1201 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Cln8Q9QUK3 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm26075-201ENSMUST00000104062 121 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm9157-201ENSMUST00000117673 225 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm12090-201ENSMUST00000118692 758 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm12691-201ENSMUST00000120186 456 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm12998-201ENSMUST00000122445 789 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm24734-201ENSMUST00000158860 262 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm23775-201ENSMUST00000158991 249 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm15974-201ENSMUST00000159103 531 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm28148-201ENSMUST00000186924 697 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm29105-201ENSMUST00000187256 450 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm19243-201ENSMUST00000198592 269 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm3010-201ENSMUST00000198805 448 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm43368-201ENSMUST00000200638 409 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm7380-201ENSMUST00000211599 466 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm17917-201ENSMUST00000218561 953 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm5175-202ENSMUST00000219699 529 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm4052-201ENSMUST00000220890 451 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm23628-201ENSMUST00000082464 173 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm42701-201ENSMUST00000196117 1657 ntBASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Cln8Q9QUK3 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.15□□□□□ -1.9
Cln8Q9QUK3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.15□□□□□ -1.9
Cln8Q9QUK3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Cln8Q9QUK3 Gm9597-202ENSMUST00000227632 1387 ntBASIC3.15□□□□□ -1.9
Cln8Q9QUK3 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm24715-201ENSMUST00000102377 95 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm25420-201ENSMUST00000104216 127 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm26145-201ENSMUST00000104476 127 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm15382-201ENSMUST00000118011 537 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm11913-201ENSMUST00000119094 336 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm6797-201ENSMUST00000119440 512 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm7855-201ENSMUST00000137737 687 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm25058-201ENSMUST00000157365 128 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm23592-201ENSMUST00000157859 117 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm5929-201ENSMUST00000166883 487 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm17030-201ENSMUST00000167016 393 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm27773-201ENSMUST00000184087 78 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm28030-201ENSMUST00000184987 138 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm43198-201ENSMUST00000200927 326 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm7786-201ENSMUST00000210494 436 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.15□□□□□ -1.91
Cln8Q9QUK3 Gm19219-201ENSMUST00000215863 724 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms