Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Trem1Q9JKE2 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.19□□□□□ -1.9
Trem1Q9JKE2 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm25728-201ENSMUST00000104525 159 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm12125-201ENSMUST00000117261 736 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm14512-201ENSMUST00000117924 230 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm13901-201ENSMUST00000137252 468 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm25965-201ENSMUST00000157170 93 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm25655-201ENSMUST00000158465 290 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm17655-201ENSMUST00000167969 255 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm22776-201ENSMUST00000178634 94 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm23767-201ENSMUST00000179278 94 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm19641-201ENSMUST00000188432 417 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm28069-201ENSMUST00000189926 214 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm38076-201ENSMUST00000193889 450 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm37523-201ENSMUST00000194901 412 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm43096-201ENSMUST00000196173 421 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm18194-201ENSMUST00000210455 481 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 AC153899.1-201ENSMUST00000214092 1117 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm19233-201ENSMUST00000219772 936 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm3565-201ENSMUST00000222670 609 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm23628-201ENSMUST00000082464 173 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm22005-201ENSMUST00000082795 141 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Trem1Q9JKE2 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.18□□□□□ -1.9
Trem1Q9JKE2 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm23319-201ENSMUST00000104467 131 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Anp32-ps-201ENSMUST00000118265 388 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm11645-201ENSMUST00000121589 649 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm11692-201ENSMUST00000122121 902 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm23886-201ENSMUST00000122684 313 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm7346-201ENSMUST00000169661 476 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm20534-201ENSMUST00000172957 172 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Olfr258-ps1-201ENSMUST00000192471 891 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Igkv12-47-201ENSMUST00000196961 356 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm44513-201ENSMUST00000206811 439 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm3829-201ENSMUST00000222362 619 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 AC096628.1-201ENSMUST00000226060 641 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm25200-201ENSMUST00000083094 130 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm22970-201ENSMUST00000083304 186 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm7676-201ENSMUST00000084055 319 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Trem1Q9JKE2 Gm6207-201ENSMUST00000120075 1386 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm6228-201ENSMUST00000178856 1386 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm23133-201ENSMUST00000104255 135 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Snora64-201ENSMUST00000104521 134 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 n-R5s16-201ENSMUST00000104555 119 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm14981-201ENSMUST00000117325 943 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm12902-201ENSMUST00000118389 322 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm8260-201ENSMUST00000119230 353 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm14562-201ENSMUST00000129885 543 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm9785-202ENSMUST00000144563 593 ntBASIC3.16□□□□□ -1.9
Trem1Q9JKE2 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms