Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm24935-201ENSMUST00000103770 110 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm12149-201ENSMUST00000117511 654 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm14681-201ENSMUST00000118047 411 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm13717-201ENSMUST00000119868 365 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm15019-201ENSMUST00000120148 434 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm24936-201ENSMUST00000122598 247 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm25519-201ENSMUST00000158392 127 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm3123-201ENSMUST00000163480 480 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm4761-201ENSMUST00000178086 582 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Mir6926-201ENSMUST00000184562 68 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm28191-201ENSMUST00000189112 211 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm43971-201ENSMUST00000205010 743 ntTSL 3 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm45080-201ENSMUST00000206648 283 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm44927-201ENSMUST00000207573 716 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Olfr936-202ENSMUST00000216912 937 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm18507-201ENSMUST00000218855 525 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm21007-201ENSMUST00000221024 326 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Olfr512-201ENSMUST00000074730 1056 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Lima1Q9ERG0 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm26423-201ENSMUST00000104277 128 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm23530-201ENSMUST00000104564 137 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm11829-201ENSMUST00000121003 282 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm25667-201ENSMUST00000157701 275 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm24008-201ENSMUST00000157733 138 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm22532-201ENSMUST00000158822 140 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm37676-201ENSMUST00000195496 507 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm18597-201ENSMUST00000209519 694 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm46233-201ENSMUST00000217831 449 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm8942-201ENSMUST00000217892 400 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm10161-201ENSMUST00000091506 204 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Lima1Q9ERG0 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.13□□□□□ -1.91
Lima1Q9ERG0 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm25727-201ENSMUST00000104522 131 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm13574-201ENSMUST00000120482 394 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm14383-201ENSMUST00000121637 386 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm26254-201ENSMUST00000122491 118 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm24289-201ENSMUST00000157629 135 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm22961-201ENSMUST00000157964 106 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm24213-201ENSMUST00000158255 258 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm27538-201ENSMUST00000185065 294 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm42438-201ENSMUST00000197832 974 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm20039-201ENSMUST00000210329 394 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 AC160931.2-201ENSMUST00000221445 351 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm9628-201ENSMUST00000222169 725 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm9309-201ENSMUST00000223537 546 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Gm8074-201ENSMUST00000095071 252 ntBASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Lima1Q9ERG0 Olfr988-203ENSMUST00000215511 1906 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Gm14971-201ENSMUST00000117980 663 ntBASIC3.11□□□□□ -1.91
Lima1Q9ERG0 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms