Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Gm21539-201ENSMUST00000177925 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm17522-201ENSMUST00000178144 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21599-201ENSMUST00000178249 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21914-201ENSMUST00000178452 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21723-201ENSMUST00000178692 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21916-201ENSMUST00000178771 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21801-201ENSMUST00000178865 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21633-201ENSMUST00000178941 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm17412-201ENSMUST00000179261 468 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21821-201ENSMUST00000179646 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21588-201ENSMUST00000180074 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21780-201ENSMUST00000180128 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21572-201ENSMUST00000180134 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm21529-201ENSMUST00000180175 498 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm29370-202ENSMUST00000187476 499 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm7142-201ENSMUST00000194232 586 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm36776-201ENSMUST00000207006 203 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm26458-201ENSMUST00000082832 128 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm22043-201ENSMUST00000082993 158 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Hmgn3Q9DCB1 AC132336.1-201ENSMUST00000222844 1740 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm11576-201ENSMUST00000117433 417 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm15988-201ENSMUST00000118677 367 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm12755-201ENSMUST00000122297 282 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm24730-201ENSMUST00000158228 117 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm20718-201ENSMUST00000176058 259 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm20651-201ENSMUST00000177219 329 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Mir6907-201ENSMUST00000183764 71 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm9775-201ENSMUST00000189402 331 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Igkv2-113-201ENSMUST00000196138 362 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm5551-201ENSMUST00000199720 690 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm45063-201ENSMUST00000203726 472 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Gm26129-201ENSMUST00000082719 107 ntBASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Hmgn3Q9DCB1 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
Hmgn3Q9DCB1 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Hmgn3Q9DCB1 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Hmgn3Q9DCB1 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Mup-ps17-201ENSMUST00000120723 218 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm23667-201ENSMUST00000157466 120 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm22187-201ENSMUST00000157819 129 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm22651-201ENSMUST00000157872 94 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm17065-201ENSMUST00000165245 239 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm27783-201ENSMUST00000183534 105 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm29259-201ENSMUST00000186396 694 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm28625-201ENSMUST00000188309 205 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm43669-201ENSMUST00000198229 436 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Gm22245-201ENSMUST00000082479 103 ntBASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Hmgn3Q9DCB1 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Hmgn3Q9DCB1 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 159.9 ms