Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm23234-201ENSMUST00000157304 134 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm15974-201ENSMUST00000159103 531 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm18604-201ENSMUST00000172535 558 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm42832-201ENSMUST00000196361 745 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm5983-201ENSMUST00000197739 770 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm43214-201ENSMUST00000199242 352 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm44665-201ENSMUST00000205381 251 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm45247-201ENSMUST00000210757 309 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm45327-201ENSMUST00000211612 565 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm34005-201ENSMUST00000215834 282 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 AC159380.1-201ENSMUST00000218096 121 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm24611-201ENSMUST00000083272 107 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cdc40Q9DC48 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Mir673-201ENSMUST00000102361 91 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm22590-201ENSMUST00000104247 128 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm22497-201ENSMUST00000104499 131 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm12788-201ENSMUST00000119090 308 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm7485-201ENSMUST00000119502 1109 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm15060-201ENSMUST00000119550 948 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm16100-201ENSMUST00000120489 231 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm16101-201ENSMUST00000160695 430 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm38329-201ENSMUST00000193473 427 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm7299-201ENSMUST00000194441 581 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm9309-201ENSMUST00000223537 546 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm2710-201ENSMUST00000073196 603 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm22245-201ENSMUST00000082479 103 ntBASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.23□□□□□ -1.89
Cdc40Q9DC48 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm15161-201ENSMUST00000117340 387 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm14795-201ENSMUST00000118461 471 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm4725-201ENSMUST00000151048 587 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm25438-201ENSMUST00000158281 110 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm22764-201ENSMUST00000158370 92 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm25519-201ENSMUST00000158392 127 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm3454-201ENSMUST00000185571 412 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm20162-201ENSMUST00000193629 871 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm44927-201ENSMUST00000207573 716 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm44857-201ENSMUST00000208331 196 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm23447-201ENSMUST00000082798 163 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Snora70-201ENSMUST00000083047 137 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm23846-201ENSMUST00000083835 107 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm25630-201ENSMUST00000084000 162 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm10161-201ENSMUST00000091506 204 ntBASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cdc40Q9DC48 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms