Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm22910-201ENSMUST00000178568 132 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm37533-201ENSMUST00000193848 545 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm30674-201ENSMUST00000214523 392 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm18903-201ENSMUST00000215343 480 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm18921-201ENSMUST00000221798 366 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm9309-201ENSMUST00000223537 546 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm26203-201ENSMUST00000082911 114 ntBASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Ccdc39Q9D5Y1 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm12025-201ENSMUST00000117768 144 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm12998-201ENSMUST00000122445 789 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm25295-201ENSMUST00000122794 306 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm7855-201ENSMUST00000137737 687 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm26487-201ENSMUST00000158022 94 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm9541-201ENSMUST00000188409 502 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm42621-201ENSMUST00000198114 275 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm42758-201ENSMUST00000202146 283 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm45696-201ENSMUST00000212088 985 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 AC164629.1-201ENSMUST00000220250 1113 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 AC158392.2-201ENSMUST00000225402 969 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm23102-201ENSMUST00000083724 116 ntBASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.06□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm14681-201ENSMUST00000118047 411 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm3851-201ENSMUST00000168653 318 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm29064-201ENSMUST00000187014 813 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm29105-201ENSMUST00000187256 450 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm37104-201ENSMUST00000193278 196 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm37418-201ENSMUST00000195031 274 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm42593-201ENSMUST00000198469 377 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm3010-201ENSMUST00000198805 448 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm43478-201ENSMUST00000200381 292 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm4528-201ENSMUST00000207905 551 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 AL772397.1-201ENSMUST00000216707 606 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 AC155929.1-201ENSMUST00000220217 1276 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Snord35b-201ENSMUST00000082833 87 ntBASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ccdc39Q9D5Y1 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm20541-201ENSMUST00000173035 1406 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm23609-201ENSMUST00000104542 127 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm13228-201ENSMUST00000118937 634 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm11797-201ENSMUST00000121336 754 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm12313-201ENSMUST00000121347 421 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm14907-201ENSMUST00000121948 854 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Adgrg4-206ENSMUST00000168724 531 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm21638-201ENSMUST00000179473 836 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm20574-201ENSMUST00000182867 917 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm29513-201ENSMUST00000185741 202 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm44118-201ENSMUST00000204665 229 ntBASIC4.04□□□□□ -1.76
Ccdc39Q9D5Y1 Gm18597-201ENSMUST00000209519 694 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms